パブリケーション

1.High-resolution crystal structure of magnesium (MgII)-iron (FeII) hybrid hemoglobin with liganded beta subunits.

Park SY, Nakagawa A, Morimoto H.

J Mol Biol. 1996 Feb 9;255(5):726-34.

2.Functional and structural comparison of nitric oxide reductases from denitrifying fungi Cylindrocarpon tonkinense and Fusarium oxysporum.

Toritsuka N, Shoun H, Singh UP, Park SY, Iizuka T, Shiro Y.

Biochim Biophys Acta. 1997 Mar 7;1338(1):93-9.

3.Crystallization, preliminary diffraction and electron paramagnetic resonance studies of a single crystal of cytochrome P450nor.

Park SY, Shimizu H, Adachi S, Shiro Y, Iizuka T, Nakagawa A, Tanaka I, Shoun H, Hori H.

FEBS Lett. 1997 Jul 28;412(2):346-50.

4.Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum.

Park SY, Shimizu H, Adachi S, Nakagawa A, Tanaka I, Nakahara K, Shoun H, Obayashi E, Nakamura H, Iizuka T, Shiro Y.

Nat Struct Biol. 1997 Oct;4(10):827-32.

5.Crystallization and preliminary X-ray diffraction analysis of a recombinant bacterial heme oxygenase (Hmu O) from Corynebacterium diphtheriae.

Chu GC, Park SY, Shiro Y, Yoshida T, Ikeda-Saito M.

J Struct Biol. 1999 Jun 15;126(2):171-4.

6.Structures of the deoxy and CO forms of haemoglobin from Dasyatis akajei, a cartilaginous fish.

Chong KT, Miyazaki G, Morimoto H, Oda Y, Park SY.

Acta Crystallogr D Biol Crystallogr. 1999 Jul;55(Pt 7):1291-300.

7.Magnesium(II) and zinc(II)-protoporphyrin IX's stabilize the lowest oxygen affinity state of human hemoglobin even more strongly than deoxyheme.

Miyazaki G, Morimoto H, Yun KM, Park SY, Nakagawa A, Minagawa H, Shibayama N.

J Mol Biol. 1999 Oct 8;292(5):1121-36.

8.Proton delivery in NO reduction by fungal nitric-oxide reductase. Cryogenic crystallography, spectroscopy, and kinetics of ferric-NO complexes of wild-type and mutant enzymes.

Shimizu H, Obayashi E, Gomi Y, Arakawa H, Park SY, Nakamura H, Adachi S, Shoun H, Shiro Y.

J Biol Chem. 2000 Feb 18;275(7):4816-26.

9.Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies.

Miyatake H, Mukai M, Park SY, Adachi S, Tamura K, Nakamura H, Nakamura K, Tsuchiya T, Iizuka T, Shiro Y.

J Mol Biol. 2000 Aug 11;301(2):415-31.

10.Crystal structures of cytochrome P450nor and its mutants (Ser286 ―>Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.

Shimizu H, Park SY, Lee D, Shoun H, Shiro Y.

J Inorg Biochem. 2000 Aug 31;81(3):191-205.

11.Crystallization and preliminary X-ray diffraction analysis of a cytochrome P450 (CYP119) from Sulfolobus solfataricus.

Park SY, Yamane K, Adachi S, Shiro Y, Weiss KE, Sligar SG.

Acta Crystallogr D Biol Crystallogr. 2000 Sep;56(Pt 9):1173-5.

12.Mutation effects of a conserved threonine (Thr243) of cytochrome P450nor on its structure and function.

Obayashi E, Shimizu H, Park SY, Shoun H, Shiro Y.

J Inorg Biochem. 2000 Nov;82(1-4):103-11.

13.X-ray crystal structure and catalytic properties of Thr252Ile mutant of cytochrome P450cam: roles of Thr252 and water in the active center.

Hishiki T, Shimada H, Nagano S, Egawa T, Kanamori Y, Makino R Park SY, Adachi S, Shiro Y, Ishimura Y.

J Biochem (Tokyo). 2000 Dec;128(6):965-74.

14.Structure of cytochrome c6 from the red alga Porphyra yezoensis at 1. 57 A resolution.

Yamada S, Park SY, Shimizu H, Koshizuka Y, Kadokura K, Satoh T, Suruga K, Ogawa M, Isogai Y, Nishio T, Shiro Y, Oku T.

Acta Crystallogr D Biol Crystallogr. 2000 Dec;56(Pt 12):1577-82.

15.A positively charged cluster formed in the heme-distal pocket of cytochrome P450nor is essential for interaction with NADH.

Kudo T, Takaya N, Park SY, Shiro Y, Shoun H.

J Biol Chem. 2001 Feb 16;276(7):5020-6.

16.Structural characterization of n-butyl-isocyanide complexes of cytochromes P450nor and P450cam.

Lee DS, Park SY, Yamane K, Obayashi E, Hori H, Shiro Y.

Biochemistry. 2001 Mar 6;40(9):2669-77.

17.Redox properties and coordination structure of the heme in the co-sensing transcriptional activator CooA.

Nakajima H, Honma Y, Tawara T, Kato T, Park SY, Miyatake H, Shiro Y, Aono S.

J Biol Chem. 2001 Mar 9;276(10):7055-61.

18.Crystal structure of rat biliverdin reductase.

Kikuchi A, Park SY, Miyatake H, Sun D, Sato M, Yoshida T, Shiro Y.

Nat Struct Biol. 2001 Mar;8(3):221-5.

19.The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.

Naoi Y, Chong KT, Yoshimatsu K, Miyazaki G, Tame JR, Park SY, Adachi S, Morimoto H.

J Mol Biol. 2001 Mar 16;307(1):259-70.

20.Crystallization and preliminary X-ray diffraction analysis of the light-harvesting protein phycocyanin from the thermophilic cyanobacterium Synechococcus elongates.

Toriumi Y, Park SY, Hashimoto H, Shimizu H, Hirano M, Kamiya N.

Acta Crystallogr D Biol Crystallogr. 2001 Sep;57(Pt 9):1326-8.

21.Characterization of the oxygenated intermediate of the thermophilic cytochrome P450 CYP119.

Denisov IG, Hung SC, Weiss KE, McLean MA, Shiro Y, Park SY, Champion PM, Sligar SG.

J Inorg Biochem. 2001 Dec 15;87(4):215-26.

22.X-ray structure of nitric oxide reductase (cytochrome P450nor) at atomic resolution.

Shimizu H, Park SY, Shiro Y, Adachi S.

Acta Crystallogr D Biol Crystallogr. 2002 Jan;58(Pt 1):81-9.

23.Crystallization and preliminary X-ray diffraction analysis of fatty-acid hydroxylase cytochrome P450BSbeta from Bacillus subtilis.

Lee DS, Yamada A, Matsunaga I, Ichihara K, Adachi S, Park SY, Shiro Y.

Acta Crystallogr D Biol Crystallogr. 2002 Apr;58(Pt 4):687-9.

24.Crystal structures of deoxy- and carbonmonoxyhemoglobin F1 from the hagfish Eptatretus burgeri.

Mito M, Chong KT, Miyazaki G, Adachi S, Park SY, Tame JR, Morimoto H.

J Biol Chem. 2002 Jun 14;277(24):21898-905.

25.Thermophilic cytochrome P450 (CYP119) from Sulfolobus solfataricus: high resolution structure and functional properties.

Park SY, Yamane K, Adachi S, Shiro Y, Weiss KE, Maves SA, Sligar SG.

J Inorg Biochem. 2002 Sep 20;91(4):491-501.

26.Crystal structure of horse carbonmonoxyhemoglobin-bezafibrate complex at 1.55-A resolution. A novel allosteric binding site in R-state hemoglobin.

Shibayama N, Miura S, Tame JR, Yonetani T, Park SY.

J Biol Chem. 2002 Oct 11;277(41):38791-6.

27.Molecular basis for the local conformational rearrangement of human phosphoserine phosphatase.

Kim HY, Heo YS, Kim JH, Park MH, Moon J, Kim E, Kwon D, Yoon J, Shin D, Jeong EJ, Park SY, Lee TG, Jeon YH, Ro S, Cho JM, Hwang KY.

J Biol Chem. 2002 Nov 29;277(48):46651-8.

28.Structure and catalytic mechanism of 2-C-methyl-D-erythritol 2, 4-cyclodiphosphate (MECDP) synthase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.

Kishida H, Wada T, Unzai S, Kuzuyama T, Takagi M, Terada T, Shirouzu M, Yokoyama S, Tame JR, Park SY.

Acta Crystallogr D Biol Crystallogr. 2003 Jan;59(Pt 1):23-31.

29.Substrate recognition and molecular mechanism of fatty acid hydroxylation by cytochrome P450 from Bacillus subtilis.Crystallographic, spectroscopic, and mutational studies.

Lee DS, Yamada A, Sugimoto H, Matsunaga I, Ogura H, Ichihara K, Adachi S, Park SY, Shiro Y.

J Biol Chem. 2003 Mar 14;278(11):9761-7.

30.Direct observation of photolysis-induced tertiary structural changes in hemoglobin.

Adachi S, Park SY, Tame JR, Shiro Y, Shibayama N.

Proc Natl Acad Sci U S A. 2003 Jun 10;100(12):7039-44.

31.tructure of a conserved CoA-binding protein synthesized by a cell-free system.

Wada T, Shirouzu M, Terada T, Ishizuka Y, Matsuda T, Kigawa T, Kuramitsu S, Park SY, Tame JR, Yokoyama S.

Acta Crystallogr D Biol Crystallogr. 2003 Jul;59(Pt 7):1213-8.

32.Crystal structure of 4- (cytidine 5'-diphospho) -2-C-methyl-D-erythritol kinase, an enzyme in the non-mevalonate pathway of isoprenoid synthesis.

Wada T, Kuzuyama T, Satoh S, Kuramitsu S, Yokoyama S, Unzai S, Tame JR, Park SY.

J Biol Chem. 2003 Aug 8;278(32):30022-7.

33.Crystal structure of the conserved protein TT1542 from Thermus thermophilus HB8.

Handa N, Terada T, Kamewari Y, Hamana H, Tame JR, Park SY, Kinoshita K, Ota M, Nakamura H, Kuramitsu S, Shirouzu M, Yokoyama S.

Protein Sci. 2003 Aug;12(8):1621-32.

34.Structure of the catalytic domain of human phosphodiesterase 5 with bound drug molecules.

Sung BJ, Hwang KY, Jeon YH, Lee JI, Heo YS, Kim JH, Moon J, Yoon JM, Hyun YL, Kim E, Eum SJ, Park SY, Lee JO, Lee TG, Ro S, Cho JM.

Nature. 2003 Sep 4;425(6953):98-102.

35.Crystal structures of the liganded and unliganded nickel-binding protein NikA from Escherichia coli.

Heddle J, Scott DJ, Unzai S, Park SY, Tame JR.

J Biol Chem. 2003 Dec 12;278(50):50322-9.

36.nfrared spectroscopic and mutational studies on putidaredoxin-induced conformational changes in ferrous CO-P450cam.

Nagano S, Shimada H, Tarumi A, Hishiki T, Kimata-Ariga Y, Egawa T, Suematsu M, Park SY, Adachi S, Shiro Y, Ishimura Y.

Biochemistry. 2003 Dec 16;42(49):14507-14.

37.Crystal structure of the human centromere protein B (CENP-B) dimerization domain at 1.65-A resolution.

Tawaramoto MS, Park SY, Tanaka Y, Nureki O, Kurumizaka H, Yokoyama S.

J Biol Chem. 2003 Dec 19;278(51):51454-61.

38.The crystal structures of the ferric and ferrous forms of the heme complex of HmuO, a heme oxygenase of Corynebacterium diphtheriae.

Hirotsu S, Chu GC, Unno M, Lee DS, Yoshida T, Park SY, Shiro Y, Ikeda-Saito M.

J Biol Chem. 2004 Mar 19;279(12):11937-47.

39.Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli.

Mizutani K, Machida Y, Unzai S, Park SY, Tame JR.

Biochemistry. 2004 Apr 20;43(15):4454-63.

40.Crystal structure of the conserved hypothetical protein TT1380 from Thermus thermophilus HB8.

Wada T, Shirouzu M, Terada T, Kamewari Y, Park SY, Tame JR, Kuramitsu S, Yokoyama S.

Proteins. 2004 May 15;55(3):778-80.

41.Multi-wavelength anomalous diffraction method for I and Xe atoms using ultra-high-energy X-rays from Spring-8.

Takada K, Miyatake H, Park SY, Kawamoto M, Kamiya N, Miki K.

J. Appl. Cryst. 2004, 27, 925−33.

42.Structural mechanism for inactivation and activation of CAD/DFF40 in the apoptotic pathway.

Woo EJ, Kim YG, Kim MS, Han WD, Shin S, Robinson H, Park SY, Oh BH.

Mol Cell. 2004 May 21;14(4):531-9.

43.Structural basis for the selective inhibition of JNK1 by the scaffolding protein JIP1 and SP600125.

Heo YS, Kim SK, Seo CI, Kim YK, Sung BJ, Lee HS, Lee JI, Park SY, Kim JH, Hwang KY, Hyun YL, Jeon YH, Ro S, Cho JM, Lee TG, Yang CH.

EMBO J. 2004 Jun 2;23(11):2185-95.

44.Novel mechanisms of pH sensitivity in tuna hemoglobin: a structural explanation of the root effect.

Yokoyama T, Chong KT, Miyazaki G, Morimoto H, Shih DT, Unzai S, Tame JR, Park SY.

J Biol Chem. 2004 Jul 2;279(27):28632-40.

45.Crystal structures of unliganded and half-liganded human hemoglobin derivatives cross-linked between Lys 82beta1 and Lys 82beta2.

Park SY, Shibayama N, Hiraki T, Tame JR.

Biochemistry. 2004 Jul 13;43(27):8711-7.

46.Crystal structure of a conserved hypothetical protein TT1751 from Thermus thermophilus HB8.

Kishishita S, Tatsuguchi A, Ushikoshi-Nakayama R, Terada T, Kuramitsu S, Park SY, Tame JR, Shirouzu M, Yokoyama S.

Proteins. 2004 Dec 1;57(4):883-7.

47.Crystal structure of a novel polyisoprenoid-binding protein from Thermus thermophilus HB8.

Handa N, Terada T, Doi-Katayama Y, Hirota H, Tame JR, Park SY, Kuramitsu S, Shirouzu M, Yokoyama S.

Protein Sci. 2005 Apr;14(4):1004-10.

48.Crystal structure of hemoglobin protease, a heme binding autotransporter protein from pathogenic Escherichia coli.

Otto BR, Sijbrandi R, Luirink J, Oudega B, Heddle JG, Mizutani K, Park SY, Tame JR.

J Biol Chem. 2005 Apr 29;280(17):17339-45.

49.Crystal structure of a clip-domain serine protease and functional roles of the clip domains.

Piao S, Song YL, Kim JH, Park SY, Park JW, Lee BL, Oh BH, Ha NC.

EMBO J. 2005 Dec 21;24(24):4404-14.

50.Crystal structure of penicillin binding protein 4 (dacB) from Escherichia coli, both in the native form and covalently linked to various antibiotics.

Kishida H, Unzai S, Roper DI, Lloyd A, Park SY, Tame JR.

Biochemistry. 2006 Jan 24;45(3):783-92.

51.R-state haemoglobin with low oxygen affinity: crystal structures of deoxy human and carbonmonoxy horse haemoglobin bound to the effector molecule L35.

Yokoyama T, Neya S, Tsuneshige A, Yonetani T, Park SY, Tame JR.

J Mol Biol. 2006 Feb 24;356(3):790-801.

52.Rounding up: Engineering 12-membered rings from the cyclic 11-mer TRAP.

Heddle JG, Yokoyama T, Yamashita I, Park SY, Tame JR.

Structure. 2006 May;14(5):925-33.

53.Crystal structure of oxidized cytochrome c(6A) from Arabidopsis thaliana.

Chida H, Yokoyama T, Kawai F, Nakazawa A, Akazaki H, Takayama Y, Hirano T, Suruga K, Satoh T, Yamada S, Kawachi R, Unzai S, Nishio T, Park SY, Oku T.

FEBS Lett. 2006 Jun 26;580(15):3763-8.

54.1.25 A resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms.

Park SY, Yokoyama T, Shibayama N, Shiro Y, Tame JR.

J Mol Biol. 2006 Jul 14;360(3):690-701.

55.Structural basis for protein recognition by B30.2/SPRY domains.

Woo JS, Suh HY, Park SY, Oh BH.

Mol Cell. 2006 Dec 28;24(6):967-76.

56.Expression, purification and crystallization of 2-oxo-hept-4-ene-1,7-dioate hydratase (HpcG) from Escherichia coli C.

Adachi T, Izumi A, Rea D, Park SY, Tame JR, Roper DI.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Oct 1;62(Pt 10):1010-2.

57.Nickel binding to NikA: an additional binding site reconciles spectroscopy, calorimetry and crystallography.

Addy C, Ohara M, Kawai F, Kidera A, Ikeguchi M, Fuchigami S, Osawa M, Shimada I, Park SY, Tame JR, Heddle JG.

Acta Crystallogr D Biol Crystallogr. 2007 Feb;63(Pt 2):221-9.

58.Structural characterization of the photoswitchable fluorescent protein Dronpa-C62S.

Nam KH, Kwon OY, Sugiyama K, Lee WH, Kim YK, Song HK, Kim EE, Park SY, Jeon H, Hwang KY.

Biochem Biophys Res Commun. 2007 Mar 23;354(4):962-7.

59.Structure and mechanism of HpcG, a hydratase in the homoprotocatechuate degradation pathway of Escherichia coli.

Izumi A, Rea D, Adachi T, Unzai S, Park SY, Roper DI, Tame JR.

J Mol Biol. 2007 Jul 27;370(5):899-911.

60.Dynamic allostery in the ring protein TRAP.

Heddle JG, Okajima T, Scott DJ, Akashi S, Park SY, Tame JR.

J Mol Biol. 2007 Aug 3;371(1):154-67.

61.Crystallization and preliminary crystallographic studies of the metalloglycoprotein esterase A4 using a baculovirus expression system.

Hiraki T, Shibayama N, Yoon YH, Yun KM, Hamamoto T, Tame JR, Park SY.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Sep 1;63(Pt 9):734-6.

62.Structural and Mutational Analysis of tRNA-Intron Splicing Endonuclease from Thermoplasma acidophilum DSM 1728: The Catalytic Mechanism of tRNA-Intron Splicing Endonucleases.

Kim YK, Mizutani K, Rhee KH, Nam KH, Lee WH, Kim EE, Park SY, Hwang KY.

J Bacteriol. 2007 Nov;189(22):8339-46.

63.Effect of N-terminal residues on the structural stability of recombinant horse L-chain apoferritin in an acidic environment.

Yoshizawa K, Mishima Y, Park SY, Heddle JG, Tame JR, Iwahori K, Kobayashi M, Yamashita I.

J Biochem. 2007 Dec;142(6):707-13.

64.Protonation States of Buried Histidine Residues in Human Deoxyhemoglobin Revealed by Neutron Crystallography.

Chatake T, Shibayama N, Park SY, Kurihara K, Tamada T, Tanaka I, Niimura N, Kuroki R, Morimoto Y.

J Am Chem Soc. 2007 Dec 5;129(48):14840-1.

65.Crystal structure of the biotin carboxylase domain of human acetyl-CoA carboxylase 2.

Cho YS, Lee JI, Shin D, Kim HT, Cheon YH, Seo CI, Kim YE, Hyun YL, Lee YS, Sugiyama K, Park SY, Ro S, Cho JM, Lee TG, Heo YS.

Proteins. 2008 Jan 1;70(1):268-72.

66.A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin.

Ozaki S, Kawakami H, Nakamura K, Fujikawa N, Kagawa W, Park SY, Yokoyama S, Kurumizaka H, Katayama T.

J Biol Chem. 2008 Mar 28;283(13):8351-62.

67.Crystal structures of the clock protein EA4 from the silkworm Bombyx mori.

Hiraki T, Shibayama N, Akashi S, Park SY.

J Mol Biol. 2008 Mar 28;377(3):630-5.

68.Intersubunit linker length as a modifier of protein stability: crystal structures and thermostability of mutant TRAP.

Watanabe M, Mishima Y, Yamashita I, Park SY, Tame JR, Heddle JG.

Protein Sci. 2008 Mar;17(3):518-26.

69.Structure of the DNA-binding domain of NgTRF1 reveals unique features of plant telomere-binding proteins.

Ko S, Jun SH, Bae H, Byun JS, Han W, Park H, Yang SW, Park SY, Jeon YH, Cheong C, Kim WT, Lee W, Cho HS.

Nucleic Acids Res. 2008 May;36(8):2739-55.

70.Preliminary time-of-flight neutron diffraction study of human deoxyhemoglobin.

Kovalevsky AY, Chatake T, Shibayama N, Park SY, Ishikawa T, Mustyakimov M, Fisher SZ, Langan P, Morimoto Y.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Apr 1;64(Pt 4):270-3.

71.The structural basis for an essential subunit interaction in influenza virus RNA polymerase.

Obayashi E, Yoshida H, Kawai F, Shibayama N, Kawaguchi A, Nagata K, Tame JR, Park SY.

Nature. 2008 Aug 28;454(7208):1127-31.

72.Characterization of heme-coordinating histidyl residues of an engineered six-coordinated myoglobin mutant based on the reactivity with diethylpyrocarbonate, mass spectrometry, and electron paramagnetic resonance spectroscopy.

Nakanishi N, Takeuchi F, Park SY, Hori H, Kiyota K, Uno T, Tsubaki M.

J Biosci Bioeng. 2008 Jun;105(6):604-13.

73.Cloning, expression and purification of cytochrome c(6) from the brown alga Hizikia fusiformis and complete X-ray diffraction analysis of the structure.

Akazaki H, Kawai F, Chida H, Matsumoto Y, Hirayama M, Hoshikawa K, Unzai S, Hakamata W, Nishio T, Park SY, Oku T.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Aug 1;64(Pt 8):674-80.

74.Physicochemical properties of diheme cytochrome c4 of unknown function from Vibrio parahaemolyticus strain RIMD2210633.

Akazaki H, Futami Y, Shibayama N, Shirasaki I, Nakade H, Chida H, Hakamata W, Park SY, Nishio T, Oku T.

Biosci Biotechnol Biochem. 2009 Jan;73(1):189-91.

75.Structural Studies of a Bacterial Condensin Complex Reveal ATP-Dependent Disruption of Intersubunit Interactions.

Woo JS, Lim JH, Shin HC, Suh MK, Ku B, Lee KH, Joo K, Robinson H, Lee J, Park SY, Ha NC, Oh BH.

Cell. 2009 Jan 9;136(1):85-96.

76.The nature of the TRAP-Anti-TRAP complex.

Watanabe M, Heddle JG, Kikuchi K, Unzai S, Akashi S, Park SY, Tame JR.

Proc Natl Acad Sci U S A. 2009 Feb 17;106(7):2176-81.

77.Visualizing breathing motion of internal cavities in concert with ligand migration in myoglobin.

Tomita A, Sato T, Ichiyanagi K, Nozawa S, Ichikawa H, Chollet M, Kawai F, Park SY, Tsuduki T, Yamato T, Koshihara SY, Adachi SI.

Proc Natl Acad Sci U S A. 2009 Feb 24;106(8):2612-6.

78.Mutational Analysis of the Substrate Specificity of Escherichia coli Penicillin Binding Protein 4 (PBP4).

Clarke T, Kawai F, Park SY, Tame JR, Dowson C, Roper D.

Biochemistry. 2009 Mar 31;48(12):2675-83.

79.RNA and Protein Complexes of trp RNA-Binding Attenuation Protein Characterized by Mass Spectrometry.

Akashi S, Watanabe M, Heddle JG, Unzai S, Park SY, Tame JR.

Anal Chem. 2009 Feb 16; 81(6):2218-26.

80.Structural insight into the essential PB1-PB2 subunit contact of the influenza virus RNA polymerase.

Sugiyama K, Obayashi E, Kawaguchi A, Suzuki Y, Tame JR, Nagata K, Park SY.

EMBO J. 2009 Jun 17;28(12):1803-11.

81.Structural and mechanistic roles of three consecutive Pro residues of porcine NADH-cytochrome b(5) reductase for the binding of beta-NADH.

Nishimura Y, Shibuya M, Muraki A, Takeuchi F, Park SY, Tsubaki M.

J Biosci Bioeng. 2009 Oct;108(4):286-92.

82.Importance of conserved Lys83 residue of Zea mays cytochrome b561 for ascorbate-specific transmembrane electron transfer as revealed by site-directed mutageneis studies.

Nakanishi N, Rahman MM, Sakamoto Y, Takigami T, Kobayashi K, Hori H, Hase T, Park SY, Tsubaki M.

Biochemistry. 2009 Nov 10;48(44):10665-78.

83.Inhibition of electron acceptance from ascorbate by the specific N-carbethoxylations of maize cytochrome b561: A common mechanism for the transmembrane electron transfer in cytochrome b561 protein family.

Nakanishi N, Rahman MM, Sakamoto Y, Miura M, Takeuchi F, Park SY, Tsubaki M.

J Biochem. 2009 Sep 16.

84.Mitotic regulation of the stability of microtubule plus-end tracking protein EB3 by ubiquitin ligase SIAH-1 and Aurora mitotic kinases.

Ban R, Matsuzaki H, Akashi T, Sakashita G, Taniguchi H, Park SY, Tanaka H, Furukawa K, Urano T.

J Biol Chem. 2009 Oct 9;284(41):28367-81.

85.Crystal Structures of Penicillin-Binding Proteins 4 and 5 from Haemophilus influenzae.

Kawai F, Clarke TB, Roper DI, Han GJ, Hwang KY, Unzai S, Obayashi E, Park SY, Tame JR.

J Mol Biol. 2010 Feb 26;396(3):634-45.

86.Direct determination of protonation states of histidine residues in a 2 A neutron structure of deoxy-human normal adult hemoglobin and implications for the Bohr effect.

Kovalevsky AY, Chatake T, Shibayama N, Park SY, Ishikawa T, Mustyakimov M, Fisher Z, Langan P, Morimoto Y.

J Mol Biol. 2010 Apr 30;398(2):276-91.

87.Autotransporter passenger proteins: virulence factors with common structural themes.

Nishimura K, Tajima N, Yoon YH, Park SY, Tame JR.

J Mol Med. 2010 May;88(5):451-8.

88.Expression, Purification, Physicochemical Characterization and Structural Analysis of Cytochrome c(554) from Vibrio parahaemolyticus Strain RIMD2210633.

Akazaki H, Kawai F, Chida H, Hirano T, Hakamata W, Park SY, Nishio T, Oku T.

Biosci Biotechnol Biochem. 2010;74(5):1113-5.

89.Crystallization and preliminary crystallographic studies of the butyrolactone autoregulator receptor protein (BarA) from Streptomyces virginiae.

Yoon YH, Kawai F, Sugiyama K, Park SY, Nihira T, Choi SU, Hwang YI.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Jun 1;66(Pt 6):662-4.

90.A Novel Intein-Like Autoproteolytic Mechanism in Autotransporter Proteins.

Tajima N, Kawai F, Park SY, Tame JR.

J Mol Biol. 2010 Jul 6.

91.Protonation states of histidine and other key residues in deoxy normal human adult hemoglobin by neutron protein crystallography.

Kovalevsky A, Chatake T, Shibayama N, Park SY, Ishikawa T, Mustyakimov M, Fisher SZ, Langan P, Morimoto Y.

Acta Crystallogr D Biol Crystallogr. 2010 Nov;66(Pt 11):1144-52.

92.Role of domains within the autotransporter Hbp/Tsh.

Nishimura K, Yoon YH, Kurihara A, Unzai S, Luirink J, Park SY, Tame JR.

Acta Crystallogr D Biol Crystallogr. 2010 Dec;66(Pt 12):1295-300.

93.Crystal structures of penicillin-binding protein 3 (PBP3) from methicillin-resistant Staphylococcus aureus in the apo and cefotaxime-bound forms.

Yoshida H, Kawai F, Obayashi E, Akashi S, Roper DI, Tame JR, Park SY.

J Mol Biol. 2012 Oct 26;423(3):351-64.

94.Structures of haemoglobin from woolly mammoth in liganded and unliganded states.

Noguchi H, Campbell KL, Ho C, Unzai S, Park SY, Tame JR.

Acta Crystallogr D Biol Crystallogr. 2012 Nov;68(Pt 11):1441-9.

95.The structure of the deacetylase domain of Escherichia coli PgaB, an enzyme required for biofilm formation: a circularly permuted member of the carbohydrate esterase 4 family.

Nishiyama T, Noguchi H, Yoshida H, Park SY, Tame JR.

Acta Crystallogr D Biol Crystallogr. 2013 Jan;69(Pt 1):44-51.